STRINGSTRING
JNHE01000001_gene193 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene193" - annotation not available in Pseudomonas oleovorans
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene193annotation not available (387 aa)    
Predicted Functional Partners:
JNHE01000002_gene2117
annotation not available (250 aa)
 
  0.926
JNHE01000043_gene3242
annotation not available (293 aa)
       
  0.923
JNHE01000018_gene3857
annotation not available (319 aa)
   
 
  0.896
JNHE01000003_gene1789
annotation not available (412 aa)
 
  0.862
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (269 aa)
   
 
  0.831
JNHE01000016_gene4474
annotation not available (736 aa)
       
  0.828
JNHE01000013_gene2802
annotation not available (325 aa)
   
 
  0.809
JNHE01000034_gene4186
annotation not available (399 aa)
       
  0.799
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate (730 aa)
   
 
  0.782
murE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan; Belongs to the MurCDEF family. MurE subfamily (487 aa)
     
 
  0.768
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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