STRINGSTRING
JNHE01000001_gene211 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene211" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene211annotation not available (129 aa)    
Predicted Functional Partners:
JNHE01000017_gene4623
annotation not available (292 aa)
   
          0.775
JNHE01000067_gene4574
annotation not available (128 aa)
   
          0.766
JNHE01000006_gene1070
annotation not available (136 aa)
   
          0.760
JNHE01000002_gene2285
annotation not available (628 aa)
   
          0.758
JNHE01000004_gene1626
annotation not available (114 aa)
   
          0.757
JNHE01000012_gene1408
annotation not available (415 aa)
   
          0.755
JNHE01000001_gene145
annotation not available (62 aa)
   
          0.755
JNHE01000017_gene4596
annotation not available (468 aa)
   
          0.740
JNHE01000010_gene3486
annotation not available (225 aa)
   
          0.739
JNHE01000017_gene4617
annotation not available (354 aa)
   
          0.733
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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