STRINGSTRING
JNHE01000001_gene224 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene224" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene224annotation not available (417 aa)    
Predicted Functional Partners:
JNHE01000001_gene225
annotation not available (186 aa)
 
  0.999
JNHE01000020_gene3970
annotation not available (1161 aa)
     
  0.834
JNHE01000006_gene1155
annotation not available (2436 aa)
     
  0.812
JNHE01000027_gene3007
annotation not available (574 aa)
     
  0.791
JNHE01000002_gene2274
annotation not available (1466 aa)
       
  0.758
JNHE01000018_gene3931
annotation not available (916 aa)
     
  0.755
JNHE01000010_gene3553
annotation not available (1404 aa)
   
  0.698
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (432 aa)
       
      0.649
JNHE01000001_gene318
annotation not available (316 aa)
   
   
    0.645
JNHE01000032_gene934
annotation not available (415 aa)
   
  0.607
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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