STRINGSTRING
JNHE01000001_gene238 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene238" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene238annotation not available (1273 aa)    
Predicted Functional Partners:
JNHE01000001_gene237
annotation not available (485 aa)
   
        0.852
JNHE01000001_gene235
Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins (162 aa)
 
        0.830
JNHE01000034_gene4191
annotation not available (263 aa)
 
        0.726
JNHE01000001_gene239
annotation not available (275 aa)
              0.725
JNHE01000001_gene240
annotation not available (477 aa)
   
        0.722
JNHE01000006_gene1030
annotation not available (528 aa)
 
        0.721
JNHE01000012_gene1444
annotation not available (269 aa)
   
          0.708
JNHE01000001_gene447
annotation not available (282 aa)
   
        0.702
JNHE01000011_gene3627
annotation not available (202 aa)
 
          0.699
JNHE01000001_gene236
annotation not available (200 aa)
   
        0.692
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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