STRINGSTRING
JNHE01000001_gene245 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene245" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene245annotation not available (145 aa)    
Predicted Functional Partners:
JNHE01000001_gene243
annotation not available (130 aa)
 
        0.949
JNHE01000001_gene246
annotation not available (203 aa)
 
        0.931
JNHE01000001_gene244
annotation not available (459 aa)
   
        0.894
JNHE01000001_gene247
annotation not available (303 aa)
 
        0.893
JNHE01000022_gene2601
annotation not available (172 aa)
   
        0.641
JNHE01000001_gene242
annotation not available (448 aa)
              0.550
JNHE01000024_gene2455
annotation not available (105 aa)
   
          0.542
JNHE01000030_gene622
annotation not available (196 aa)
   
        0.521
JNHE01000018_gene3879
annotation not available (845 aa)
   
          0.487
JNHE01000031_gene698
annotation not available (718 aa)
   
        0.485
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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