STRINGSTRING
JNHE01000001_gene247 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene247" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene247annotation not available (303 aa)    
Predicted Functional Partners:
JNHE01000001_gene246
annotation not available (203 aa)
   
   
  0.922
JNHE01000001_gene245
annotation not available (145 aa)
 
        0.893
JNHE01000001_gene244
annotation not available (459 aa)
   
        0.840
JNHE01000001_gene243
annotation not available (130 aa)
 
          0.816
JNHE01000030_gene613
annotation not available (308 aa)
 
   
  0.805
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (213 aa)
       
    0.645
JNHE01000011_gene3571
annotation not available (57 aa)
   
 
  0.558
JNHE01000030_gene616
annotation not available (262 aa)
         
  0.530
znuC
Zinc import ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family (262 aa)
         
  0.516
JNHE01000002_gene2405
annotation not available (287 aa)
   
        0.500
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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