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JNHE01000001_gene252 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene252" - RNA polymerase sigma-54 factor in Pseudomonas oleovorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene252RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (489 aa)    
Predicted Functional Partners:
JNHE01000001_gene347
annotation not available (446 aa)
 
   
  0.974
JNHE01000007_gene1267
annotation not available (491 aa)
 
   
  0.917
JNHE01000002_gene2274
annotation not available (1466 aa)
   
 
  0.915
JNHE01000041_gene3159
annotation not available (477 aa)
 
   
  0.899
rpoS
annotation not available (316 aa)
         
  0.886
JNHE01000012_gene1434
annotation not available (606 aa)
   
 
  0.879
JNHE01000007_gene1269
annotation not available (471 aa)
 
   
  0.870
JNHE01000001_gene251
annotation not available (102 aa)
 
   
  0.867
JNHE01000001_gene348
annotation not available (524 aa)
     
 
  0.866
JNHE01000001_gene250
annotation not available (154 aa)
   
  0.863
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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