STRINGSTRING
JNHE01000001_gene260 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene260" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene260annotation not available (156 aa)    
Predicted Functional Partners:
JNHE01000001_gene259
annotation not available (265 aa)
  0.999
JNHE01000001_gene261
annotation not available (210 aa)
   
  0.998
JNHE01000001_gene258
annotation not available (269 aa)
  0.996
JNHE01000006_gene1188
annotation not available (379 aa)
  0.982
JNHE01000001_gene262
annotation not available (101 aa)
       
  0.973
JNHE01000006_gene1189
annotation not available (261 aa)
 
  0.866
JNHE01000008_gene3754
annotation not available (234 aa)
 
     
  0.831
lolA
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (208 aa)
   
        0.788
argA
annotation not available (432 aa)
   
        0.738
rpoH
annotation not available (264 aa)
 
      0.735
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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