STRINGSTRING
JNHE01000001_gene289 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene289" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene289annotation not available (119 aa)    
Predicted Functional Partners:
JNHE01000001_gene288
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (197 aa)
 
        0.895
JNHE01000001_gene290
annotation not available (561 aa)
 
        0.890
JNHE01000001_gene287
annotation not available (177 aa)
              0.827
JNHE01000015_gene4399
annotation not available (497 aa)
 
        0.807
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (273 aa)
   
        0.634
JNHE01000003_gene1924
annotation not available (301 aa)
     
        0.601
JNHE01000033_gene980
annotation not available (126 aa)
     
        0.596
JNHE01000035_gene4257
annotation not available (246 aa)
 
        0.585
JNHE01000003_gene1860
annotation not available (737 aa)
 
        0.568
JNHE01000013_gene2787
annotation not available (371 aa)
 
        0.554
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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