STRINGSTRING
JNHE01000001_gene308 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene308" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene308annotation not available (112 aa)    
Predicted Functional Partners:
JNHE01000001_gene309
annotation not available (464 aa)
 
        0.904
JNHE01000001_gene310
annotation not available (425 aa)
 
          0.883
JNHE01000022_gene2593
annotation not available (470 aa)
     
  0.748
JNHE01000011_gene3567
annotation not available (582 aa)
     
  0.748
JNHE01000004_gene1690
annotation not available (450 aa)
     
  0.748
JNHE01000001_gene284
annotation not available (259 aa)
   
   
  0.685
JNHE01000001_gene283
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (403 aa)
   
   
  0.661
JNHE01000020_gene3979
annotation not available (201 aa)
 
   
  0.645
JNHE01000001_gene282
annotation not available (164 aa)
   
   
  0.571
JNHE01000068_gene2664
annotation not available (308 aa)
   
   
  0.497
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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