STRINGSTRING
JNHE01000001_gene317 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene317" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene317annotation not available (208 aa)    
Predicted Functional Partners:
JNHE01000042_gene3203
annotation not available (452 aa)
     
 
  0.912
JNHE01000001_gene318
annotation not available (316 aa)
   
      0.904
JNHE01000008_gene3745
annotation not available (161 aa)
     
 
  0.878
gshB
annotation not available (318 aa)
       
  0.856
JNHE01000022_gene2598
annotation not available (200 aa)
 
   
    0.853
JNHE01000009_gene3309
annotation not available (161 aa)
     
 
  0.843
JNHE01000002_gene2277
annotation not available (208 aa)
   
   
    0.780
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (683 aa)
     
  0.768
lysS
annotation not available (500 aa)
     
  0.764
JNHE01000040_gene83
annotation not available (556 aa)
     
 
  0.758
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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