STRINGSTRING
JNHE01000001_gene344 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene344" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene344annotation not available (243 aa)    
Predicted Functional Partners:
JNHE01000001_gene345
annotation not available (182 aa)
 
   
  0.960
JNHE01000001_gene343
annotation not available (827 aa)
 
   
  0.938
JNHE01000001_gene341
annotation not available (100 aa)
 
   
  0.850
JNHE01000001_gene342
annotation not available (100 aa)
   
   
  0.751
JNHE01000006_gene1036
annotation not available (190 aa)
 
     
  0.706
JNHE01000003_gene1997
annotation not available (127 aa)
 
     
  0.662
JNHE01000041_gene3164
annotation not available (344 aa)
         
  0.615
JNHE01000001_gene165
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (269 aa)
         
  0.566
JNHE01000041_gene3163
annotation not available (381 aa)
         
  0.554
JNHE01000006_gene1035
annotation not available (206 aa)
 
     
  0.553
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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