STRINGSTRING
JNHE01000001_gene409 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene409" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene409annotation not available (266 aa)    
Predicted Functional Partners:
JNHE01000001_gene408
annotation not available (426 aa)
   
  0.994
JNHE01000001_gene410
annotation not available (415 aa)
 
   
  0.981
JNHE01000001_gene412
annotation not available (140 aa)
 
   
  0.972
JNHE01000001_gene411
annotation not available (251 aa)
 
     
  0.969
JNHE01000001_gene413
annotation not available (474 aa)
 
     
  0.927
JNHE01000001_gene407
annotation not available (176 aa)
 
          0.923
JNHE01000001_gene414
annotation not available (318 aa)
 
     
  0.902
JNHE01000001_gene415
annotation not available (316 aa)
              0.896
JNHE01000055_gene1781
annotation not available (177 aa)
 
     
  0.795
JNHE01000055_gene1780
annotation not available (181 aa)
 
          0.773
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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