STRINGSTRING
JNHE01000001_gene425 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene425" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene425annotation not available (157 aa)    
Predicted Functional Partners:
JNHE01000001_gene426
annotation not available (281 aa)
              0.716
JNHE01000010_gene3473
annotation not available (426 aa)
   
          0.528
JNHE01000011_gene3572
annotation not available (328 aa)
   
          0.470
JNHE01000001_gene427
annotation not available (268 aa)
              0.442
JNHE01000018_gene3920
annotation not available (415 aa)
   
          0.427
JNHE01000029_gene758
annotation not available (105 aa)
   
          0.413
JNHE01000017_gene4612
annotation not available (123 aa)
   
          0.412
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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