STRINGSTRING
arcA protein (Pseudomonas oleovorans) - STRING interaction network
"arcA" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcAannotation not available (416 aa)    
Predicted Functional Partners:
JNHE01000001_gene435
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (336 aa)
 
 
  0.998
JNHE01000001_gene434
annotation not available (308 aa)
 
 
  0.989
JNHE01000001_gene437
annotation not available (475 aa)
 
   
  0.988
JNHE01000004_gene1611
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (297 aa)
   
 
  0.967
JNHE01000016_gene4474
annotation not available (736 aa)
   
 
  0.911
argG
annotation not available (405 aa)
     
 
  0.880
JNHE01000022_gene2597
annotation not available (475 aa)
 
   
  0.868
JNHE01000003_gene1796
annotation not available (338 aa)
         
  0.862
argH
annotation not available (464 aa)
     
 
  0.858
speA
Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine (637 aa)
         
  0.848
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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