STRINGSTRING
JNHE01000001_gene444 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene444" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene444annotation not available (299 aa)    
Predicted Functional Partners:
JNHE01000001_gene442
annotation not available (200 aa)
 
   
  0.964
clpS
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (81 aa)
       
      0.743
JNHE01000001_gene445
annotation not available (332 aa)
              0.679
JNHE01000001_gene443
annotation not available (137 aa)
   
        0.661
JNHE01000004_gene1561
annotation not available (353 aa)
         
  0.588
JNHE01000013_gene2776
annotation not available (311 aa)
           
  0.546
JNHE01000001_gene441
annotation not available (318 aa)
              0.513
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (494 aa)
       
 
  0.490
JNHE01000025_gene2864
annotation not available (199 aa)
     
   
  0.475
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (333 aa)
     
      0.431
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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