STRINGSTRING
JNHE01000001_gene463 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene463" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene463annotation not available (870 aa)    
Predicted Functional Partners:
JNHE01000033_gene955
annotation not available (465 aa)
   
 
 
  0.786
JNHE01000042_gene3197
annotation not available (307 aa)
       
 
  0.722
JNHE01000007_gene1219
annotation not available (301 aa)
       
 
  0.722
JNHE01000004_gene1665
annotation not available (338 aa)
       
 
  0.722
JNHE01000008_gene3727
annotation not available (309 aa)
       
 
  0.709
JNHE01000006_gene1130
annotation not available (349 aa)
     
      0.681
pstB
Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family (277 aa)
       
      0.679
JNHE01000047_gene1533
annotation not available (328 aa)
       
 
  0.678
JNHE01000040_gene90
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (372 aa)
       
 
  0.678
JNHE01000026_gene3084
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (365 aa)
       
 
  0.678
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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