STRINGSTRING
JNHE01000001_gene464 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene464" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene464annotation not available (447 aa)    
Predicted Functional Partners:
JNHE01000001_gene467
annotation not available (232 aa)
   
  0.831
JNHE01000001_gene466
annotation not available (211 aa)
   
  0.797
JNHE01000035_gene4227
annotation not available (461 aa)
 
        0.784
JNHE01000002_gene2185
annotation not available (441 aa)
 
        0.777
JNHE01000023_gene2575
annotation not available (392 aa)
     
        0.596
JNHE01000029_gene747
annotation not available (498 aa)
     
        0.588
JNHE01000009_gene3363
annotation not available (498 aa)
     
        0.588
JNHE01000001_gene465
annotation not available (392 aa)
   
   
  0.569
JNHE01000006_gene1175
annotation not available (779 aa)
   
        0.430
JNHE01000002_gene2221
annotation not available (299 aa)
     
        0.418
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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