STRINGSTRING
JNHE01000001_gene467 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene467" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene467annotation not available (232 aa)    
Predicted Functional Partners:
JNHE01000001_gene466
annotation not available (211 aa)
  0.999
JNHE01000001_gene465
annotation not available (392 aa)
 
 
  0.911
JNHE01000016_gene4561
annotation not available (714 aa)
   
 
  0.901
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family (696 aa)
   
 
  0.901
JNHE01000009_gene3328
annotation not available (391 aa)
 
 
  0.863
JNHE01000002_gene2221
annotation not available (299 aa)
       
  0.860
JNHE01000016_gene4562
annotation not available (401 aa)
 
 
  0.852
JNHE01000002_gene2202
annotation not available (394 aa)
 
 
  0.843
JNHE01000011_gene3589
annotation not available (392 aa)
 
 
  0.841
JNHE01000001_gene464
annotation not available (447 aa)
   
  0.831
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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