STRINGSTRING
JNHE01000001_gene491 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene491" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene491annotation not available (408 aa)    
Predicted Functional Partners:
JNHE01000001_gene488
annotation not available (340 aa)
 
   
  0.964
JNHE01000001_gene489
annotation not available (262 aa)
 
          0.941
JNHE01000001_gene493
annotation not available (533 aa)
 
     
  0.897
JNHE01000001_gene490
annotation not available (447 aa)
   
        0.859
JNHE01000023_gene2562
annotation not available (205 aa)
   
  0.657
JNHE01000001_gene492
annotation not available (516 aa)
 
          0.582
rhlB
ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA; Belongs to the DEAD box helicase family. RhlB subfamily (473 aa)
     
  0.527
JNHE01000011_gene3686
annotation not available (450 aa)
     
  0.527
JNHE01000006_gene1147
annotation not available (591 aa)
     
  0.527
JNHE01000006_gene1106
annotation not available (458 aa)
     
  0.527
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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