STRINGSTRING
JNHE01000001_gene496 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene496" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene496annotation not available (546 aa)    
Predicted Functional Partners:
JNHE01000053_gene2692
annotation not available (512 aa)
 
          0.724
JNHE01000006_gene1012
annotation not available (594 aa)
   
   
  0.687
JNHE01000004_gene1759
annotation not available (609 aa)
         
  0.607
ftsH
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family (637 aa)
     
   
  0.555
JNHE01000001_gene497
annotation not available (830 aa)
              0.545
JNHE01000035_gene4236
annotation not available (292 aa)
     
        0.536
JNHE01000002_gene2253
annotation not available (304 aa)
     
        0.536
JNHE01000004_gene1667
annotation not available (618 aa)
         
  0.519
JNHE01000002_gene2274
annotation not available (1466 aa)
 
 
  0.517
JNHE01000001_gene451
annotation not available (905 aa)
 
     
  0.517
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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