STRINGSTRING
JNHE01000001_gene500 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene500" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene500annotation not available (100 aa)    
Predicted Functional Partners:
JNHE01000001_gene501
annotation not available (519 aa)
 
          0.891
JNHE01000012_gene1430
annotation not available (116 aa)
   
          0.638
JNHE01000055_gene1780
annotation not available (181 aa)
 
          0.612
JNHE01000029_gene712
annotation not available (64 aa)
   
          0.576
JNHE01000015_gene4433
annotation not available (331 aa)
   
          0.548
JNHE01000001_gene499
annotation not available (157 aa)
              0.543
JNHE01000022_gene2587
annotation not available (73 aa)
   
          0.518
JNHE01000010_gene3439
annotation not available (249 aa)
   
          0.517
JNHE01000003_gene1881
annotation not available (173 aa)
   
          0.511
JNHE01000006_gene1108
annotation not available (243 aa)
   
          0.503
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (11%) [HD]