STRINGSTRING
JNHE01000001_gene558 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene558" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene558annotation not available (318 aa)    
Predicted Functional Partners:
proS
Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction- proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as ’pretransfer’ editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated ’posttransfer’ editing and involves deacy [...] (571 aa)
   
        0.800
JNHE01000022_gene2631
annotation not available (107 aa)
   
        0.787
JNHE01000028_gene810
annotation not available (248 aa)
   
          0.782
JNHE01000018_gene3872
annotation not available (157 aa)
   
          0.781
JNHE01000014_gene2936
annotation not available (177 aa)
   
          0.779
JNHE01000002_gene2091
annotation not available (88 aa)
   
          0.777
JNHE01000050_gene2718
annotation not available (84 aa)
   
          0.776
JNHE01000032_gene908
annotation not available (144 aa)
   
          0.773
JNHE01000003_gene1830
annotation not available (200 aa)
   
          0.772
JNHE01000001_gene262
annotation not available (101 aa)
   
          0.772
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (11%) [HD]