STRINGSTRING
slyX protein (Pseudomonas oleovorans) - STRING interaction network
"slyX" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slyXannotation not available (68 aa)    
Predicted Functional Partners:
JNHE01000001_gene562
annotation not available (118 aa)
   
        0.900
JNHE01000012_gene1402
Branched-chain amino acid transport system carrier protein; Component of the transport system for branched-chain amino acids (423 aa)
           
  0.530
JNHE01000006_gene1072
annotation not available (83 aa)
   
        0.506
JNHE01000034_gene4178
annotation not available (230 aa)
   
          0.498
JNHE01000034_gene4177
annotation not available (943 aa)
   
          0.496
JNHE01000015_gene4430
annotation not available (163 aa)
         
  0.479
JNHE01000008_gene3728
annotation not available (114 aa)
   
          0.466
JNHE01000003_gene1889
annotation not available (172 aa)
   
          0.443
JNHE01000001_gene447
annotation not available (282 aa)
   
          0.437
JNHE01000029_gene766
annotation not available (59 aa)
   
          0.423
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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