STRINGSTRING
JNHE01000001_gene578 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene578" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene578annotation not available (165 aa)    
Predicted Functional Partners:
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (432 aa)
 
  0.995
JNHE01000001_gene579
annotation not available (248 aa)
 
 
  0.950
JNHE01000001_gene575
annotation not available (137 aa)
 
 
  0.943
JNHE01000001_gene574
annotation not available (223 aa)
 
 
  0.938
bamA
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (773 aa)
   
 
  0.930
JNHE01000001_gene576
annotation not available (317 aa)
 
 
 
  0.907
JNHE01000003_gene1866
annotation not available (415 aa)
   
 
  0.902
JNHE01000003_gene1864
annotation not available (414 aa)
   
 
  0.898
lolA
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (208 aa)
 
 
  0.877
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel (188 aa)
   
 
  0.850
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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