STRINGSTRING
JNHE01000002_gene2071 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000002_gene2071" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000002_gene2071annotation not available (166 aa)    
Predicted Functional Partners:
JNHE01000009_gene3396
annotation not available (127 aa)
   
          0.704
JNHE01000032_gene917
annotation not available (232 aa)
   
          0.684
JNHE01000002_gene2142
annotation not available (91 aa)
   
          0.660
JNHE01000036_gene4324
annotation not available (109 aa)
   
          0.657
JNHE01000013_gene2822
annotation not available (149 aa)
   
          0.631
JNHE01000030_gene648
annotation not available (236 aa)
   
          0.612
JNHE01000004_gene1589
annotation not available (214 aa)
   
          0.592
JNHE01000002_gene2241
annotation not available (320 aa)
   
          0.538
JNHE01000017_gene4613
annotation not available (95 aa)
   
          0.535
JNHE01000022_gene2626
annotation not available (226 aa)
   
          0.533
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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