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JNHE01000002_gene2238 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000002_gene2238" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000002_gene2238annotation not available (190 aa)    
Predicted Functional Partners:
JNHE01000002_gene2239
annotation not available (251 aa)
 
 
  0.991
JNHE01000002_gene2240
annotation not available (764 aa)
 
   
  0.953
JNHE01000002_gene2241
annotation not available (320 aa)
 
          0.942
JNHE01000002_gene2237
annotation not available (166 aa)
 
     
0.917
JNHE01000002_gene2236
annotation not available (177 aa)
 
     
0.805
JNHE01000006_gene1121
annotation not available (162 aa)
 
 
 
  0.756
JNHE01000015_gene4465
annotation not available (292 aa)
   
          0.493
JNHE01000030_gene627
annotation not available (904 aa)
   
          0.478
JNHE01000003_gene1944
annotation not available (473 aa)
   
          0.468
JNHE01000009_gene3274
annotation not available (116 aa)
   
     
  0.458
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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