STRINGSTRING
JNHE01000002_gene2272 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000002_gene2272" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000002_gene2272annotation not available (57 aa)    
Predicted Functional Partners:
JNHE01000025_gene2880
annotation not available (249 aa)
   
          0.745
JNHE01000001_gene123
annotation not available (160 aa)
   
          0.729
JNHE01000012_gene1430
annotation not available (116 aa)
   
          0.701
JNHE01000003_gene1926
annotation not available (88 aa)
   
          0.670
JNHE01000020_gene3962
annotation not available (276 aa)
   
          0.650
JNHE01000004_gene1668
annotation not available (226 aa)
   
          0.617
JNHE01000013_gene2757
annotation not available (153 aa)
   
          0.600
JNHE01000025_gene2876
annotation not available (460 aa)
   
          0.579
JNHE01000018_gene3868
annotation not available (351 aa)
   
          0.550
JNHE01000002_gene2167
annotation not available (383 aa)
   
          0.541
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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