STRINGSTRING
JNHE01000002_gene2279 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000002_gene2279" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000002_gene2279annotation not available (301 aa)    
Predicted Functional Partners:
JNHE01000002_gene2278
annotation not available (296 aa)
 
       
0.880
JNHE01000002_gene2277
annotation not available (208 aa)
 
     
  0.813
JNHE01000015_gene4384
annotation not available (305 aa)
   
          0.617
JNHE01000002_gene2276
annotation not available (663 aa)
 
          0.609
JNHE01000002_gene2280
annotation not available (206 aa)
              0.608
JNHE01000015_gene4397
annotation not available (306 aa)
   
          0.548
JNHE01000004_gene1756
annotation not available (289 aa)
   
          0.485
JNHE01000025_gene2860
annotation not available (295 aa)
   
          0.481
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family (878 aa)
         
  0.464
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (333 aa)
     
      0.431
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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