STRINGSTRING
dsdA protein (Pseudomonas oleovorans) - STRING interaction network
"dsdA" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsdAannotation not available (433 aa)    
Predicted Functional Partners:
JNHE01000064_gene114
annotation not available (462 aa)
         
  0.859
ilvA
L-threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (504 aa)
     
 
  0.832
JNHE01000011_gene3653
annotation not available (322 aa)
         
  0.778
JNHE01000013_gene2803
annotation not available (323 aa)
         
  0.729
JNHE01000001_gene523
annotation not available (312 aa)
     
 
    0.721
JNHE01000002_gene2315
annotation not available (73 aa)
              0.622
JNHE01000026_gene3062
annotation not available (420 aa)
       
    0.520
JNHE01000001_gene310
annotation not available (425 aa)
       
    0.520
JNHE01000009_gene3330
annotation not available (321 aa)
   
 
    0.476
JNHE01000003_gene2032
annotation not available (455 aa)
   
   
  0.441
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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