STRINGSTRING
JNHE01000002_gene2373 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000002_gene2373" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000002_gene2373annotation not available (313 aa)    
Predicted Functional Partners:
JNHE01000002_gene2374
annotation not available (277 aa)
 
          0.903
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (333 aa)
       
 
  0.732
JNHE01000001_gene176
annotation not available (575 aa)
       
      0.668
JNHE01000002_gene2375
annotation not available (287 aa)
 
       
0.530
JNHE01000002_gene2400
annotation not available (293 aa)
   
   
  0.477
JNHE01000002_gene2398
annotation not available (648 aa)
   
   
  0.470
JNHE01000007_gene1303
annotation not available (113 aa)
     
        0.455
JNHE01000003_gene1976
annotation not available (283 aa)
   
   
  0.445
lpxB
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (354 aa)
       
      0.444
JNHE01000013_gene2737
annotation not available (443 aa)
     
        0.420
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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