STRINGSTRING
JNHE01000002_gene2405 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000002_gene2405" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000002_gene2405annotation not available (287 aa)    
Predicted Functional Partners:
JNHE01000002_gene2406
annotation not available (159 aa)
 
  0.979
JNHE01000022_gene2601
annotation not available (172 aa)
 
  0.948
JNHE01000013_gene2764
annotation not available (168 aa)
 
  0.943
JNHE01000018_gene3881
annotation not available (177 aa)
 
  0.942
JNHE01000002_gene2385
annotation not available (174 aa)
 
 
  0.937
JNHE01000001_gene137
annotation not available (155 aa)
 
 
  0.936
JNHE01000007_gene1225
annotation not available (128 aa)
 
 
  0.935
JNHE01000031_gene702
annotation not available (168 aa)
 
 
  0.931
JNHE01000030_gene629
annotation not available (167 aa)
 
 
  0.927
JNHE01000013_gene2767
annotation not available (184 aa)
 
 
  0.925
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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