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JNHE01000003_gene1796 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene1796" - annotation not available in Pseudomonas oleovorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene1796annotation not available (338 aa)    
Predicted Functional Partners:
astB
N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) (448 aa)
 
 
  0.999
astD
N-succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate (487 aa)
   
  0.998
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily (337 aa)
 
   
  0.990
JNHE01000003_gene1797
annotation not available (338 aa)
 
 
0.961
argD
annotation not available (406 aa)
 
   
  0.937
arcA
annotation not available (416 aa)
         
  0.862
speA
Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine (637 aa)
         
  0.850
JNHE01000016_gene4474
annotation not available (736 aa)
     
 
  0.845
argH
annotation not available (464 aa)
         
  0.819
JNHE01000035_gene4232
annotation not available (381 aa)
   
   
  0.785
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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