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JNHE01000003_gene1799 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene1799" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene1799annotation not available (326 aa)    
Predicted Functional Partners:
argD
annotation not available (406 aa)
         
  0.745
JNHE01000003_gene1800
annotation not available (254 aa)
   
   
  0.711
JNHE01000003_gene1797
annotation not available (338 aa)
 
     
  0.710
JNHE01000003_gene1801
annotation not available (232 aa)
         
  0.696
JNHE01000003_gene1802
annotation not available (229 aa)
         
  0.667
JNHE01000003_gene1796
annotation not available (338 aa)
 
     
  0.645
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (602 aa)
       
 
  0.613
rpoH
annotation not available (264 aa)
       
      0.600
rpoS
annotation not available (316 aa)
       
      0.600
JNHE01000004_gene1611
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (297 aa)
           
  0.593
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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