STRINGSTRING
JNHE01000003_gene1820 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene1820" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene1820annotation not available (69 aa)    
Predicted Functional Partners:
JNHE01000003_gene1821
annotation not available (237 aa)
 
          0.809
JNHE01000015_gene4368
annotation not available (264 aa)
       
  0.780
JNHE01000015_gene4364
annotation not available (302 aa)
       
  0.754
JNHE01000003_gene1822
annotation not available (306 aa)
 
          0.720
JNHE01000042_gene3186
annotation not available (263 aa)
       
  0.638
JNHE01000015_gene4367
annotation not available (308 aa)
       
  0.549
JNHE01000022_gene2644
annotation not available (216 aa)
       
  0.506
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide (403 aa)
   
        0.434
JNHE01000042_gene3216
annotation not available (331 aa)
       
  0.410
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (348 aa)
       
  0.410
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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