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JNHE01000003_gene1849 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene1849" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene1849annotation not available (297 aa)    
Predicted Functional Partners:
JNHE01000003_gene1851
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (317 aa)
 
        0.833
JNHE01000011_gene3641
annotation not available (253 aa)
 
   
    0.759
JNHE01000003_gene1850
annotation not available (231 aa)
   
        0.754
JNHE01000017_gene4590
annotation not available (379 aa)
           
  0.546
JNHE01000003_gene1998
annotation not available (284 aa)
           
  0.541
JNHE01000001_gene259
annotation not available (265 aa)
 
        0.521
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family (204 aa)
           
  0.471
JNHE01000040_gene73
annotation not available (457 aa)
 
 
 
  0.454
rpoS
annotation not available (316 aa)
           
  0.452
JNHE01000021_gene4063
annotation not available (186 aa)
         
  0.450
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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