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JNHE01000003_gene1850 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene1850" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene1850annotation not available (231 aa)    
Predicted Functional Partners:
JNHE01000003_gene1851
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (317 aa)
   
        0.942
JNHE01000026_gene3074
annotation not available (226 aa)
   
   
0.866
JNHE01000009_gene3330
annotation not available (321 aa)
   
 
    0.841
JNHE01000049_gene1496
annotation not available (499 aa)
       
  0.834
JNHE01000049_gene1498
annotation not available (405 aa)
       
    0.832
JNHE01000049_gene1497
annotation not available (351 aa)
       
  0.804
JNHE01000023_gene2545
annotation not available (225 aa)
   
   
 
0.764
JNHE01000032_gene910
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (372 aa)
       
    0.759
JNHE01000003_gene1849
annotation not available (297 aa)
   
        0.754
JNHE01000018_gene3884
annotation not available (310 aa)
   
 
    0.750
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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