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JNHE01000003_gene1901 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene1901" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene1901annotation not available (304 aa)    
Predicted Functional Partners:
JNHE01000011_gene3609
annotation not available (438 aa)
 
 
  0.898
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (874 aa)
   
  0.819
JNHE01000016_gene4554
annotation not available (450 aa)
       
  0.745
JNHE01000010_gene3523
annotation not available (583 aa)
   
  0.737
JNHE01000012_gene1422
annotation not available (128 aa)
         
  0.715
JNHE01000003_gene1900
annotation not available (287 aa)
            0.696
JNHE01000045_gene3816
annotation not available (1190 aa)
     
    0.694
JNHE01000032_gene934
annotation not available (415 aa)
     
    0.694
JNHE01000032_gene900
annotation not available (365 aa)
     
    0.694
JNHE01000001_gene400
annotation not available (545 aa)
     
    0.694
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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