STRINGSTRING
JNHE01000003_gene1914 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene1914" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene1914annotation not available (536 aa)    
Predicted Functional Partners:
JNHE01000006_gene1029
annotation not available (1441 aa)
     
0.984
JNHE01000006_gene1028
annotation not available (472 aa)
 
  0.944
JNHE01000003_gene1915
annotation not available (259 aa)
         
  0.860
JNHE01000018_gene3889
annotation not available (445 aa)
   
  0.852
JNHE01000002_gene2301
annotation not available (340 aa)
 
  0.851
JNHE01000031_gene692
annotation not available (370 aa)
 
  0.849
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (953 aa)
     
 
  0.840
JNHE01000002_gene2371
annotation not available (444 aa)
   
 
  0.812
JNHE01000041_gene3155
annotation not available (456 aa)
   
 
  0.812
JNHE01000001_gene438
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family (1311 aa)
       
  0.796
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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