STRINGSTRING
JNHE01000003_gene1947 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene1947" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene1947annotation not available (151 aa)    
Predicted Functional Partners:
JNHE01000003_gene1945
annotation not available (118 aa)
   
  0.984
JNHE01000003_gene1948
annotation not available (229 aa)
 
   
  0.968
JNHE01000003_gene1946
annotation not available (427 aa)
 
   
  0.932
JNHE01000017_gene4600
annotation not available (121 aa)
       
  0.921
JNHE01000003_gene2058
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (362 aa)
   
 
  0.838
JNHE01000006_gene1134
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (666 aa)
   
  0.824
JNHE01000015_gene4459
annotation not available (108 aa)
   
 
  0.764
JNHE01000032_gene906
annotation not available (290 aa)
   
 
  0.758
JNHE01000006_gene1016
annotation not available (144 aa)
   
 
  0.758
JNHE01000001_gene318
annotation not available (316 aa)
       
  0.730
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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