STRINGSTRING
JNHE01000003_gene1955 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene1955" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene1955annotation not available (191 aa)    
Predicted Functional Partners:
JNHE01000010_gene3469
annotation not available (672 aa)
   
 
  0.855
JNHE01000003_gene1956
annotation not available (87 aa)
              0.845
JNHE01000011_gene3668
annotation not available (255 aa)
 
  0.835
JNHE01000033_gene976
annotation not available (316 aa)
   
  0.817
JNHE01000001_gene360
annotation not available (315 aa)
   
  0.817
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (931 aa)
   
  0.801
JNHE01000020_gene3988
annotation not available (192 aa)
   
 
      0.796
JNHE01000006_gene1004
annotation not available (217 aa)
   
  0.793
JNHE01000042_gene3203
annotation not available (452 aa)
   
  0.791
JNHE01000012_gene1399
annotation not available (478 aa)
   
  0.791
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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