STRINGSTRING
JNHE01000003_gene1976 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene1976" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene1976annotation not available (283 aa)    
Predicted Functional Partners:
JNHE01000003_gene1978
annotation not available (662 aa)
  0.976
JNHE01000002_gene2398
annotation not available (648 aa)
  0.947
JNHE01000003_gene1977
annotation not available (67 aa)
 
          0.904
JNHE01000002_gene2077
annotation not available (462 aa)
 
  0.842
JNHE01000012_gene1478
annotation not available (503 aa)
 
  0.836
JNHE01000011_gene3699
annotation not available (473 aa)
 
  0.833
JNHE01000025_gene2862
annotation not available (480 aa)
   
  0.712
JNHE01000030_gene623
annotation not available (439 aa)
   
  0.712
JNHE01000022_gene2594
annotation not available (466 aa)
   
  0.712
JNHE01000018_gene3846
annotation not available (429 aa)
   
  0.712
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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