STRINGSTRING
JNHE01000003_gene2001 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene2001" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene2001annotation not available (148 aa)    
Predicted Functional Partners:
JNHE01000003_gene2002
annotation not available (256 aa)
 
   
  0.988
JNHE01000003_gene2003
annotation not available (190 aa)
 
   
  0.814
JNHE01000003_gene2004
annotation not available (193 aa)
   
   
  0.805
JNHE01000003_gene2063
annotation not available (644 aa)
 
          0.749
JNHE01000003_gene2000
annotation not available (463 aa)
   
   
  0.741
JNHE01000029_gene769
annotation not available (213 aa)
 
          0.715
JNHE01000004_gene1605
annotation not available (853 aa)
   
        0.657
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (599 aa)
   
   
  0.580
JNHE01000003_gene1998
annotation not available (284 aa)
   
        0.566
JNHE01000001_gene268
annotation not available (380 aa)
   
   
  0.540
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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