STRINGSTRING
JNHE01000003_gene2004 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene2004" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene2004annotation not available (193 aa)    
Predicted Functional Partners:
JNHE01000003_gene2003
annotation not available (190 aa)
   
 
  0.982
JNHE01000003_gene2002
annotation not available (256 aa)
 
 
  0.978
JNHE01000015_gene4431
annotation not available (157 aa)
       
 
  0.809
JNHE01000003_gene2001
annotation not available (148 aa)
   
   
  0.805
JNHE01000007_gene1246
annotation not available (400 aa)
       
      0.759
JNHE01000010_gene3417
annotation not available (438 aa)
       
 
  0.753
JNHE01000007_gene1274
annotation not available (448 aa)
       
 
  0.753
JNHE01000007_gene1237
Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP (270 aa)
       
 
  0.753
JNHE01000006_gene1156
annotation not available (272 aa)
       
 
  0.753
JNHE01000028_gene774
annotation not available (268 aa)
       
 
  0.742
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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