STRINGSTRING
JNHE01000003_gene2009 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene2009" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene2009annotation not available (278 aa)    
Predicted Functional Partners:
JNHE01000003_gene2010
annotation not available (250 aa)
 
          0.786
JNHE01000003_gene2008
annotation not available (313 aa)
              0.771
JNHE01000007_gene1299
annotation not available (275 aa)
 
          0.745
JNHE01000007_gene1273
annotation not available (266 aa)
   
          0.724
JNHE01000043_gene3219
annotation not available (137 aa)
 
     
  0.714
JNHE01000007_gene1293
Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) (262 aa)
 
          0.697
JNHE01000007_gene1280
annotation not available (173 aa)
 
     
  0.696
JNHE01000007_gene1268
annotation not available (404 aa)
   
 
      0.682
JNHE01000007_gene1236
annotation not available (291 aa)
 
 
      0.675
JNHE01000027_gene3007
annotation not available (574 aa)
     
 
  0.650
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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