STRINGSTRING
JNHE01000003_gene2016 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene2016" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene2016annotation not available (499 aa)    
Predicted Functional Partners:
JNHE01000003_gene2014
annotation not available (325 aa)
 
  0.980
JNHE01000003_gene2015
annotation not available (147 aa)
 
   
    0.954
JNHE01000001_gene516
annotation not available (325 aa)
 
  0.948
JNHE01000003_gene2017
annotation not available (340 aa)
 
        0.929
JNHE01000003_gene2011
annotation not available (464 aa)
 
          0.605
JNHE01000003_gene2013
annotation not available (420 aa)
   
        0.556
JNHE01000015_gene4376
annotation not available (450 aa)
     
        0.530
astB
N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) (448 aa)
     
        0.530
JNHE01000001_gene132
annotation not available (1009 aa)
     
 
    0.529
JNHE01000003_gene1796
annotation not available (338 aa)
     
        0.519
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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