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JNHE01000003_gene2018 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene2018" - annotation not available in Pseudomonas oleovorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
JNHE01000003_gene2018annotation not available (288 aa)    
Predicted Functional Partners:
tyrS
Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily (399 aa)
   
 
  0.595
JNHE01000003_gene2019
annotation not available (222 aa)
              0.576
rlmL
Ribosomal RNA large subunit methyltransferase K/L; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA; Belongs to the methyltransferase superfamily. RlmKL family (725 aa)
   
 
  0.571
JNHE01000046_gene3777
annotation not available (237 aa)
 
  0.541
JNHE01000001_gene156
annotation not available (774 aa)
       
      0.518
JNHE01000025_gene2842
annotation not available (482 aa)
   
   
  0.509
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (269 aa)
   
 
  0.473
rhlB
ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA; Belongs to the DEAD box helicase family. RhlB subfamily (473 aa)
   
 
  0.443
JNHE01000011_gene3686
annotation not available (450 aa)
   
 
  0.443
JNHE01000006_gene1147
annotation not available (591 aa)
   
 
  0.443
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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