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JNHE01000003_gene2023 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene2023" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene2023annotation not available (169 aa)    
Predicted Functional Partners:
JNHE01000003_gene2022
annotation not available (127 aa)
              0.845
gpsA
annotation not available (340 aa)
   
      0.683
JNHE01000003_gene2029
annotation not available (913 aa)
   
        0.575
JNHE01000003_gene2024
annotation not available (110 aa)
              0.562
JNHE01000003_gene2028
annotation not available (109 aa)
              0.554
JNHE01000003_gene2027
annotation not available (501 aa)
              0.554
JNHE01000003_gene2026
annotation not available (167 aa)
              0.554
JNHE01000003_gene2025
annotation not available (89 aa)
              0.554
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily (464 aa)
       
      0.493
JNHE01000001_gene244
annotation not available (459 aa)
       
      0.493
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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