STRINGSTRING
JNHE01000003_gene2034 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000003_gene2034" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000003_gene2034annotation not available (177 aa)    
Predicted Functional Partners:
JNHE01000003_gene2033
annotation not available (377 aa)
              0.579
JNHE01000001_gene234
Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape (327 aa)
     
   
  0.500
JNHE01000046_gene3778
annotation not available (68 aa)
   
          0.476
JNHE01000059_gene996
annotation not available (221 aa)
   
          0.469
JNHE01000004_gene1755
annotation not available (226 aa)
   
          0.463
JNHE01000001_gene147
annotation not available (164 aa)
   
          0.458
tyrS
Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily (399 aa)
     
        0.446
JNHE01000006_gene1184
annotation not available (429 aa)
   
          0.444
JNHE01000003_gene2032
annotation not available (455 aa)
 
          0.435
JNHE01000020_gene4002
annotation not available (272 aa)
   
          0.415
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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