STRINGSTRING
JNHE01000004_gene1558 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000004_gene1558" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000004_gene1558annotation not available (259 aa)    
Predicted Functional Partners:
JNHE01000004_gene1557
annotation not available (225 aa)
 
          0.808
JNHE01000004_gene1555
annotation not available (103 aa)
 
          0.742
JNHE01000004_gene1556
annotation not available (970 aa)
 
          0.715
JNHE01000025_gene2869
annotation not available (327 aa)
     
        0.670
JNHE01000001_gene521
annotation not available (518 aa)
 
   
  0.544
JNHE01000004_gene1553
annotation not available (291 aa)
 
     
  0.540
JNHE01000004_gene1554
annotation not available (413 aa)
 
        0.532
JNHE01000015_gene4353
annotation not available (342 aa)
 
  0.485
JNHE01000023_gene2505
annotation not available (527 aa)
 
  0.481
JNHE01000004_gene1552
annotation not available (288 aa)
 
          0.476
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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